BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039H06LP1|AL430766
(965 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig787 1899 0.0
>3x_Contig787
Length = 1880
Score = 1899 bits (958), Expect = 0.0
Identities = 963/965 (99%)
Strand = Plus / Minus
Query: 1 atcgtccgaaaacatactgcgaccaagtccagtgctgtagatacgttgcagcagcagttc 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1867 atcgtccganaacatactgcgaccaagtccagtgctgtagatacgttgcagcagcagttc 1808
Query: 61 ggtgggtacggttcacatgcgccaatgattcaaagagctttaggtagaattcctggctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1807 ggtgggtacggttcacatgcgccaatgattcaaagagctttaggtagaattcctggctta 1748
Query: 121 ccacctttggaacaatgggataatgaatggatcactgaagttgttaagtcgttcatgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1747 ccacctttggaacaatgggataatgaatggatcactgaagttgttaagtcgttcatgcaa 1688
Query: 181 gagaagttccccactgtgttggctttgaacaagatggatcatccagatgcggataaaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1687 gagaagttccccactgtgttggctttgaacaagatggatcatccagatgcggataaaaac 1628
Query: 241 gttagtaagattatgttgaaataccctgacgttaaatgtgtcctaacaagtgccatcacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1627 gttagtaagattatgttgaaataccctgacgttaaatgtgtcctaacaagtgccatcacc 1568
Query: 301 gaagttttcctccgtaaattgaagaaacaagggttcatacgttacgaagaaggcacagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1567 gaagttttcctccgtaaattgaagaaacaagggttcatacgttacgaagaaggcacagaa 1508
Query: 361 tttgttgatacgtttgaagatgacgatacgttaaaaccgttagatgagaaactgatacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1507 tttgttgatacgtttgaagatgacgatacgttaaaaccgttagatgagaaactgatacag 1448
Query: 421 agaattgaagttatacgagaccttgtactatacagattcggttctacaggtgtcgttcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1447 agaattgaagttatacgagaccttgtactatacagattcggttctacaggtgtcgttcaa 1388
Query: 481 gtattacaggcagctgcaagtactttaaatttgatcccggtgtacacggtacgcaacatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1387 gtattacaggcagctgcaagtactttaaatttgatcccggtgtacacggtacgcaacatc 1328
Query: 541 cataccttcgctggtgggaacggtgaaaatgtgttccgcgattgttttctggtcaagaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 cataccttcgctggtgggaacggtgaaaatgtgttccgcgattgttttctggtcaagaag 1268
Query: 601 gggactacggtagggaaagttgctacttacattatgggtgacgtcactgtagctgctatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1267 gggactacggtagggaaagttgctacttacattatgggtgacgtcactgtagctgctatt 1208
Query: 661 gaaactgttggtggtatcagggtcagtgaagatgataaggtggacgaaggtgttaacgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1207 gaaactgttggtggtatcagggtcagtgaagatgataaggtggacgaaggtgttaacgat 1148
Query: 721 atcttgacattcaaacttgcaccaaagagtaagttagtacaggaaaaccaaaaaaaatag 780
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1147 atcttgacattcaaacttgcaccaaagagtaagtaagtacaggaaaaccaaaaaaaatag 1088
Query: 781 taatagaaacaataataaatagatacaatctattacggattacagcagcccagtattctt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 taatagaaacaataataaatagatacaatctattacggattacagcagcccagtattctt 1028
Query: 841 ctgggatatagacctaaaacgtttaacaatagctaaaaataataatgaaagaattgcata 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 ctgggatatagacctaaaacgtttaacaatagctaaaaataataatgaaagaattgcata 968
Query: 901 ctagtagttatattagaattgtaataaactcgaactaaattaaggttaatttttgaggcc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 ctagtagttatattagaattgtaataaactcgaactaaattaaggttaatttttgaggcc 908
Query: 961 tgacc 965
|||||
Sbjct: 907 tgacc 903
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7571
Number of Sequences: 1807
Number of extensions: 7571
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 965
length of database: 10,358,551
effective HSP length: 16
effective length of query: 949
effective length of database: 10,329,639
effective search space: 9802827411
effective search space used: 9802827411
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)